.. sphinxcontrib-matlabdomain documentation master file, created by
   sphinx-quickstart on Tue Jul 17 11:53:15 2018.
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Functions used for Li & Munro, 2021
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Here is the documentation for all of the customized MatLab functions used in (Li and Munro, 2021). The code is available in corresponding github (`page`_)Please note that we used a MatLab implementation of the Crocker and Grier method (`kilfoil`_) for particle detection, and Jaqaman and Danuser method (`uTrack`_) for particle tracking.



.. toctree::
   :caption: Contents:
   :numbered:

   content1.rst
   content2.rst



Indices and tables
==================

* :ref:`genindex`
* `MATLAB Module Index <mat-modindex.html>`_
* :ref:`search`


.. _kilfoil: http://people.umass.edu/kilfoil/downloads.html
.. _uTrack: https://github.com/DanuserLab/u-track
.. _page: https://github.com/younanli/Li_2021/tree/master/src